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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 22ChIP-seq
  • 2ATAC-seq
  • 1DNase-seq
  • 1pCHi-C
Assay category
  • 22DNA binding
  • 3DNA accessibility
Target of assay
  • 17control
  • 5RNA binding protein
  • 5transcription factor
Date released
  • 22October, 2018
  • 1August, 2017
  • 1August, 2018
  • 1November, 2018
  • 1October, 2017
Available data
  • 26fastq
  • 25bam
  • 8bed narrowPeak
  • 8bigWig
  • 7bigBed narrowPeak
  • 1bed bed3+
  • 1bed broadPeak
  • 1bedpe bed3+
  • 1bigBed broadPeak
Organism
  • 26Homo sapiens
Biosample type
  • 25tissue
  • 1in vitro differentiated cells
Organ
  • 295pancreas
  • 157epithelium
  • 80liver
  • 45blood
  • 45bodily fluid
  • 27connective tissue
  • 26adipose tissue
  • 17spleen
  • 1brain
Project
  • 26AMP
Genome assembly (visualization)
  • 8GRCh38
  • 8hg19
Lab
  • 26AMP-T2D consortium
BIOSAMPLE
ASSAY

26 results

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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
subcutaneous adipose tissue121
omental fat pad1011
in vitro differentiated cells
white fat cell1
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