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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
95
ATAC-seq
49
WGBS
13
ChIP-seq
11
single cell RNA-seq
2
DNase-seq
Assay category
136
Transcription
97
DNA accessibility
49
DNA methylation
13
DNA binding
Target of assay
8
transcription factor
5
control
4
RNA binding protein
Date released
104
May, 2022
92
August, 2017
40
September, 2018
15
October, 2018
7
August, 2020
7
July, 2018
6
February, 2021
5
April, 2018
5
October, 2017
5
September, 2017
4
November, 2018
3
September, 2020
1
August, 2018
1
March, 2019
Available data
215
fastq
198
bam
179
bigWig
136
tsv
80
zippedFastqFolder
54
bed narrowPeak
32
bigBed narrowPeak
6
txt
4
bed broadPeak
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
295
Homo sapiens
Biosample type
157
primary cell
138
tissue
Organ
295
pancreas
157
epithelium
80
liver
45
blood
45
bodily fluid
27
connective tissue
26
adipose tissue
17
spleen
1
brain
Project
199
AMP
96
HPAP
Genome assembly (visualization)
185
hg19
179
GRCh38
Lab
173
AMP-T2D consortium
96
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
295 results
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total RNA-seq
ATAC-seq
WGBS
ChIP-seq
single cell RNA-seq
DNase-seq
primary cell
pancreatic alpha cell
10
35
31
3
pancreatic beta cell
10
23
16
2
pancreatic acinar cell
4
9
2
pancreatic ductal cell
4
4
2
pancreatic delta cell
2
tissue
islet of Langerhans
97
20
body of pancreas
4
2
13
2
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