Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 125total RNA-seq
  • 95ATAC-seq
  • 49WGBS
  • 13ChIP-seq
  • 11single cell RNA-seq
  • 2DNase-seq
Assay category
  • 136Transcription
  • 97DNA accessibility
  • 49DNA methylation
  • 13DNA binding
Target of assay
  • 8transcription factor
  • 5control
  • 4RNA binding protein
Date released
  • 104May, 2022
  • 92August, 2017
  • 40September, 2018
  • 15October, 2018
  • 7August, 2020
  • 7July, 2018
  • 6February, 2021
  • 5April, 2018
  • 5October, 2017
  • 5September, 2017
  • 4November, 2018
  • 3September, 2020
  • 1August, 2018
  • 1March, 2019
Available data
  • 215fastq
  • 198bam
  • 179bigWig
  • 136tsv
  • 80zippedFastqFolder
  • 54bed narrowPeak
  • 32bigBed narrowPeak
  • 6txt
  • 4bed broadPeak
  • 2bed bed3+
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 2bigBed broadPeak
Organism
  • 295Homo sapiens
Biosample type
  • 157primary cell
  • 138tissue
Organ
  • 295pancreas
  • 157epithelium
  • 80liver
  • 45blood
  • 45bodily fluid
  • 27connective tissue
  • 26adipose tissue
  • 17spleen
  • 1brain
Project
  • 199AMP
  • 96HPAP
Genome assembly (visualization)
  • 185hg19
  • 179GRCh38
Lab
  • 173AMP-T2D consortium
  • 96Klaus Kaestner, Upenn
  • 24Kyle Gaulton, UCSD
  • 1Mark McCarthy, Oxford
  • 1Stephen Parker, UMich
BIOSAMPLE
ASSAY

295 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
WGBS
ChIP-seq
single cell RNA-seq
DNase-seq
primary cell
pancreatic alpha cell1035313
pancreatic beta cell1023162
pancreatic acinar cell492
pancreatic ductal cell442
pancreatic delta cell2
tissue
islet of Langerhans9720
body of pancreas42132
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego