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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
95
ATAC-seq
13
ChIP-seq
11
single cell RNA-seq
2
DNase-seq
2
WGBS
Assay category
136
Transcription
97
DNA accessibility
13
DNA binding
2
DNA methylation
Target of assay
8
transcription factor
5
control
4
RNA binding protein
Date released
92
August, 2017
63
May, 2022
40
September, 2018
15
October, 2018
7
August, 2020
7
July, 2018
5
April, 2018
5
October, 2017
5
September, 2017
4
November, 2018
3
September, 2020
1
August, 2018
1
March, 2019
Available data
209
fastq
198
bam
179
bigWig
130
tsv
54
bed narrowPeak
39
zippedFastqFolder
32
bigBed narrowPeak
6
txt
4
bed broadPeak
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
248
Homo sapiens
Biosample type
138
tissue
110
primary cell
Organ
248
pancreas
110
epithelium
80
liver
45
blood
45
bodily fluid
27
connective tissue
26
adipose tissue
17
spleen
1
brain
Project
199
AMP
49
HPAP
Genome assembly (visualization)
185
hg19
179
GRCh38
Lab
173
AMP-T2D consortium
49
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
248 results
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total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
DNase-seq
WGBS
tissue
islet of Langerhans
97
20
body of pancreas
4
13
2
2
primary cell
pancreatic alpha cell
10
35
3
pancreatic beta cell
10
23
2
pancreatic acinar cell
4
9
2
pancreatic ductal cell
4
4
2
pancreatic delta cell
2
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