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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
384
ChIP-seq
1
RRBS
1
WGBS
Assay category
384
DNA binding
2
DNA methylation
Target of assay
278
transcription factor
82
recombinant protein
67
control
49
RNA binding protein
37
histone
37
histone modification
22
broad histone mark
15
narrow histone mark
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
272
November, 2017
59
December, 2017
41
November, 2018
14
August, 2017
Available data
386
fastq
383
bam
325
bigWig
306
bed narrowPeak
303
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
3
bed bed3+
3
tar
1
bed bedMethyl
1
bigBed bedMethyl
Organism
386
Homo sapiens
Biosample type
309
cell line
62
tissue
15
in vitro differentiated cells
Organ
386
liver
257
pancreas
181
epithelium
74
connective tissue
27
embryo
20
brain
18
adipose tissue
15
blood
15
bodily fluid
7
spleen
6
vasculature
3
blood vessel
2
musculature of body
Project
386
AMP
Genome assembly (visualization)
323
hg19
277
GRCh38
Lab
386
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
7
missing controlled_by
Audit category:
20
inconsistent control read length
BIOSAMPLE
ASSAY
386 results
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ChIP-seq
RRBS
WGBS
cell line
HepG2
309
tissue
liver
54
1
1
right lobe of liver
6
in vitro differentiated cells
hepatocyte
15
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