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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 107total RNA-seq
  • 102single cell RNA-seq
  • 7ChIP-seq
Assay category
  • 209Transcription
  • 7DNA binding
Target of assay
  • 6histone
  • 6histone modification
  • 4broad histone mark
  • 2narrow histone mark
  • 1control
Date released
  • 76February, 2023
  • 42July, 2018
  • 37April, 2018
  • 35September, 2020
  • 15February, 2018
  • 7August, 2017
  • 2August, 2018
  • 2June, 2018
Available data
  • 198fastq
  • 105bam
  • 104bigWig
  • 98tsv
  • 19zippedFastqFolder
  • 7tagAlign
  • 6bed broadPeak
  • 6bed narrowPeak
  • 6bigBed narrowPeak
Organism
  • 209Homo sapiens
Biosample type
  • 188primary cell
  • 15in vitro differentiated cells
  • 13tissue
Organ
  • 125pancreas
  • 109epithelium
  • 4embryo
  • 3connective tissue
Project
  • 111HPAP
  • 105AMP
Genome assembly (visualization)
  • 104GRCh38
  • 104hg19
Lab
  • 111Klaus Kaestner, Upenn
  • 105AMP-T2D consortium
Audit category:
  • 7inconsistent ontology term
Audit category:
  • 1inconsistent assembly
replicates.library.nucleic_acid_term_name!
  • DNA
BIOSAMPLE
ASSAY

216 results

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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
primary cell
pancreatic alpha cell4210
exocrine cell39
pancreatic beta cell1110
Langerhans cell19
pancreatic delta cell9
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
tissue
pancreas7
islet of Langerhans6
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