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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 68ChIP-seq
Assay category
  • 68DNA binding
Target of assay
  • 345transcription factor
  • 222histone
  • 222histone modification
  • 127control
  • 115broad histone mark
  • 106narrow histone mark
  • 82recombinant protein
  • 68RNA binding protein
  • 25chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 31November, 2017
  • 19November, 2018
  • 8August, 2017
  • 5January, 2019
  • 3December, 2017
  • 2October, 2018
Available data
  • 68bam
  • 68fastq
  • 66bigWig
  • 65bed narrowPeak
  • 60bigBed narrowPeak
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 68Homo sapiens
Biosample type
  • 52cell line
  • 6in vitro differentiated cells
  • 5primary cell
  • 5tissue
Organ
  • 49liver
  • 6blood
  • 6bodily fluid
  • 4connective tissue
  • 4epithelium
  • 4pancreas
  • 3brain
  • 2vasculature
  • 1blood vessel
Project
  • 68AMP
Genome assembly (visualization)
  • 65hg19
  • 62GRCh38
Lab
  • 68AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 3inconsistent control read length
BIOSAMPLE
ASSAY

68 results

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Clear Filters
ChIP-seq
cell line
HepG246
GM128786
in vitro differentiated cells
adipocyte4
hepatocyte2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
tissue
islet of Langerhans2
body of pancreas1
liver1
pancreas1
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