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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 25ChIP-seq
Assay category
  • 25DNA binding
Target of assay
  • 345transcription factor
  • 222histone
  • 222histone modification
  • 127control
  • 115broad histone mark
  • 106narrow histone mark
  • 82recombinant protein
  • 68RNA binding protein
  • 25chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 9November, 2017
  • 5January, 2019
  • 3August, 2017
  • 3December, 2017
  • 3November, 2018
  • 2December, 2018
Available data
  • 25bam
  • 25bed narrowPeak
  • 25bigWig
  • 25fastq
  • 23bigBed narrowPeak
  • 5bed broadPeak
  • 5bigBed broadPeak
Organism
  • 25Homo sapiens
Biosample type
  • 19cell line
  • 3in vitro differentiated cells
  • 2tissue
  • 1primary cell
Organ
  • 13liver
  • 9blood
  • 9bodily fluid
  • 2connective tissue
  • 1epithelium
Project
  • 25AMP
Genome assembly (visualization)
  • 25GRCh38
  • 25hg19
Lab
  • 25AMP-T2D consortium
Audit category:
  • 3inconsistent control
Audit category:
  • 6inconsistent control read length
BIOSAMPLE
ASSAY

25 results

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ChIP-seq
cell line
HepG210
GM128789
in vitro differentiated cells
adipocyte2
hepatocyte1
tissue
liver2
primary cell
skeletal muscle myoblast1
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