Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 345ChIP-seq
Assay category
  • 345DNA binding
Target of assay
  • 345transcription factor
  • 222histone
  • 222histone modification
  • 127control
  • 115broad histone mark
  • 106narrow histone mark
  • 82recombinant protein
  • 68RNA binding protein
  • 25chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 206November, 2017
  • 46August, 2017
  • 43November, 2018
  • 40December, 2017
  • 6January, 2019
  • 2December, 2018
  • 2October, 2018
Available data
  • 345fastq
  • 344bam
  • 340bigWig
  • 313bed narrowPeak
  • 283bigBed narrowPeak
  • 49bed broadPeak
  • 49bigBed broadPeak
  • 19bed bed3+
  • 3tar
Organism
  • 345Homo sapiens
Biosample type
  • 250cell line
  • 57tissue
  • 33in vitro differentiated cells
  • 5primary cell
Organ
  • 278liver
  • 34connective tissue
  • 12adipose tissue
  • 10blood
  • 10bodily fluid
  • 9pancreas
  • 4epithelium
  • 3brain
  • 3embryo
  • 2vasculature
  • 1blood vessel
Project
  • 345AMP
Genome assembly (visualization)
  • 336hg19
  • 305GRCh38
Lab
  • 345AMP-T2D consortium
Audit category:
  • 28inconsistent control
Audit category:
  • 29missing controlled_by
Audit category:
  • 18inconsistent control read length
BIOSAMPLE
ASSAY

345 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2240
GM1287810
tissue
liver36
white adipose tissue12
islet of Langerhans7
body of pancreas1
pancreas1
in vitro differentiated cells
adipocyte22
pancreatic endoderm3
Posterior foregut2
definitive endodermal cell2
hepatocyte2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego