Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
38
Gene expression
7
Accessible chromatin
Date released
30
May, 2022
2
August, 2021
2
July, 2025
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
June, 2025
1
March, 2023
1
March, 2024
1
September, 2020
1
September, 2023
Available data
41
h5ad
5
mtx
4
rds
3
tsv
Organism
42
Homo sapiens
Biosample type
40
tissue
7
primary cell
Organ
8
pancreas
5
musculature of body
3
blood
3
bodily fluid
3
heart
3
lung
bone element
2
connective tissue
2
epithelium
2
intestine
2
kidney
2
mouth
1
adipose tissue
1
bone marrow
1
eye
1
large intestine
1
liver
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
1
vasculature
Project
39
AMP
2
LungMap
2
T1D
2
community
Encyclopedia version
1
fusion_consented.snatac.h5ad
1
fusion_consented.snrna_post_decontx.h5ad
lab.title!
Bing Ren, UCSD
organ_slims!
bone element
BIOSAMPLE
TYPE
45 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans
2
4
heart
4
pancreas
3
1
lung
2
1
kidney
2
+ See 22 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
cell
1
endothelial cell
1
+ See 3 more…
See all biosamples