Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 80candidate regulatory elements
  • 65target gene predictions
  • 63differential activity
  • 55accessible chromatin
  • 49gene expression
  • 48chromatin state
  • 31binding sites
  • 25histone modifications
  • 21eQTL
  • 9variant allelic effects
  • 6Fine-mapped variants
  • 3caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 120September, 2022
  • 109February, 2021
  • 51May, 2026
  • 20June, 2020
  • 17September, 2023
  • 16May, 2021
  • 12October, 2022
  • 11August, 2021
  • 10January, 2020
  • 10May, 2020
  • 9February, 2020
  • 9February, 2024
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 7November, 2022
  • 6January, 2022
  • 5July, 2026
  • 3April, 2020
  • 3November, 2020
  • 2January, 2021
  • 2January, 2025
  • 2July, 2025
  • 2May, 2024
  • 2October, 2019
  • 2September, 2018
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
  • 1May, 2022
Available data
  • 285bed bed3+
  • 64tsv
  • 41bed bed9
  • 23bigWig
  • 7txt
  • 2bigBed bed9
  • 2csv
  • 1bed bed3
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 459Homo sapiens
Collection Tags
  • 120EpiMap
  • 65ChIP-Atlas
  • 61DGA
  • 58ENCODE
  • 51pyxis
  • 38 T2DKP
  • 17T2DKP
  • 16AMP
  • 15KPMP
  • 10CMDGA
  • 10GTEx
  • 9HPAP
  • 9T1D
  • 7T2D
  • 6eQTLCatalogue
  • 5ENCODE-rE2G
  • 1BLUEPRINT
Biosample type
  • 279primary cell
  • 96tissue
  • 52in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 3365blood
  • 2894vasculature
  • 2858blood vessel
  • 2853bodily fluid
  • 2659vein
  • 903brain
  • 801epithelium
  • 753kidney
  • 478heart
  • 459connective tissue
  • 430lung
  • 373musculature of body
  • 336intestine
  • 298pancreas
  • 285skin of body
  • 244limb
  • 234liver
  • 220large intestine
  • 213embryo
  • 171extraembryonic component
  • 157eye
  • 142adipose tissue
  • 129stomach
  • 111muscle organ
  • 105bone element
  • 97mammary gland
  • 95placenta
  • 93small intestine
  • 92thymus
  • 91adrenal gland
  • 91uterus
  • 88artery
  • 86prostate gland
  • 73ureter
  • 64penis
  • 63spleen
  • 62gonad
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 44thyroid gland
  • 42esophagus
  • 31testis
  • 30ovary
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21mouth
  • 18lymphatic vessel
  • 15breast
  • 13bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12bone marrow
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 431AMP
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 328hg19
  • 76GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

459 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
differential activity
accessible chromatin
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
primary cell
osteoblast2252132
fibroblast of lung6442
foreskin fibroblast621142
fibroblast of dermis4431
fibroblast of cardiac tissue333
tissue
adipose tissue78236141
omental fat pad5422223
subcutaneous adipose tissue2251613
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte4741611
mesenchymal stem cell341211
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248211111
fibroblast of cardiac tissue212
HT1080211
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego