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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 253gene expression
  • 134accessible chromatin
  • 100candidate regulatory elements
  • 92differential activity
  • 73target gene predictions
  • 53chromatin state
  • 43binding sites
  • 28histone modifications
  • 18variant allelic effects
  • 4eQTL
  • 3caQTL
Date released
  • 196February, 2021
  • 155September, 2023
  • 151September, 2022
  • 53February, 2024
  • 38March, 2023
  • 34May, 2021
  • 25June, 2020
  • 23August, 2021
  • 20January, 2021
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 7April, 2020
  • 6August, 2018
  • 6March, 2020
  • 6October, 2022
  • 5October, 2019
  • 3August, 2017
  • 3July, 2025
  • 2March, 2024
  • 1July, 2020
  • 1May, 2022
  • 1November, 2019
Available data
  • 397bed bed3+
  • 326tsv
  • 98bigWig
  • 78txt
  • 50bed bed9
  • 14bigBed narrowPeak
  • 6csv
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
  • 1bed bed3
  • 1bed narrowPeak
Organism
  • 801Homo sapiens
Collection Tags
  • 177DGA
  • 155KPMP
  • 144EpiMap
  • 81ChIP-Atlas
  • 62ENCODE
  • 45 T2DKP
  • 44HPAP
  • 35T1D
  • 31AMP
  • 30CMDGA
  • 21T2DKP
  • 4T2D
  • 2GTEx
Biosample type
  • 671primary cell
  • 61tissue
  • 43cell line
  • 26in vitro differentiated cells
Organ
  • 2894vasculature
  • 2853bodily fluid
  • 2845blood vessel
  • 2842blood
  • 2658vein
  • 801epithelium
  • 666kidney
  • 485brain
  • 454connective tissue
  • 385heart
  • 373musculature of body
  • 301lung
  • 280pancreas
  • 267intestine
  • 244limb
  • 213embryo
  • 193skin of body
  • 191liver
  • 168large intestine
  • 143extraembryonic component
  • 138adipose tissue
  • 108stomach
  • 105eye
  • 88bone element
  • 83artery
  • 81uterus
  • 80mammary gland
  • 80small intestine
  • 77prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 62adrenal gland
  • 62lymph node
  • 60__MARKER__
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 39esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21ovary
  • 20thyroid gland
  • 19mouth
  • 18lymphatic vessel
  • 18skeleton
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 617AMP
  • 155KPMP
  • 20T1D
  • 7LungMap
  • 2community
Genome assembly (visualization)
  • 449hg19
  • 107GRCh38
Encyclopedia version
  • 1Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

801 results

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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
hepatocyte137121141
endothelial cell9512123
epithelial cell of proximal tubule16121111
glomerular endothelial cell1422111
endothelial cell of umbilical vein264521
tissue
pigmented layer of retina20
breast epithelium1532
esophagus squamous epithelium1622
kidney epithelium11
pancreatic ductal cell2
cell line
EndoC_BH188311
keratinocyte31
choroid plexus epithelial cell111
colon epithelial cell111
epithelial cell of prostate111
in vitro differentiated cells
retinal pigment epithelial cell6
hepatocyte211
foreskin keratinocyte111
hepatocyte(AFP)3
mammary gland epithelial cell111
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