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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
Assay category
76
DNA binding
Target of assay
154
histone
154
histone modification
78
broad histone mark
76
narrow histone mark
54
control
20
transcription factor
10
RNA binding protein
5
nucleotide modification
Date released
34
August, 2017
15
September, 2018
11
October, 2018
5
October, 2019
4
November, 2019
3
March, 2020
2
May, 2021
1
June, 2019
1
May, 2019
Available data
70
bigWig
68
bam
60
bed narrowPeak
48
fastq
20
bigBed narrowPeak
7
tagAlign
6
bed bed3+
4
bed broadPeak
Organism
74
Homo sapiens
Biosample type
34
tissue
32
primary cell
9
cell line
1
in vitro differentiated cells
Organ
117
brain
73
pancreas
58
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
72
AMP
4
T1D
Genome assembly (visualization)
70
hg19
68
GRCh38
Lab
76
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
lab.title!
Bing Ren, UCSD
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
18
body of pancreas
6
endocrine pancreas
6
pancreas
4
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
+ See 1 more…
cell line
EndoC_BH1
6
Panc1
3
in vitro differentiated cells
pancreatic PP cell
1
See all biosamples
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