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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 55accessible chromatin
  • 18candidate regulatory elements
  • 9chromatin state
  • 9target gene predictions
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
  • 1eQTL
  • 1gene expression
Date released
  • 27September, 2022
  • 24February, 2023
  • 22November, 2022
  • 17February, 2021
  • 6June, 2020
  • 2February, 2020
  • 2January, 2020
  • 2May, 2020
  • 2October, 2022
  • 1February, 2024
Available data
  • 95bed bed3+
  • 32bigWig
  • 9bed bed9
  • 2tsv
Organism
  • 105Homo sapiens
Collection Tags
  • 47CMDGA
  • 27EpiMap
  • 14ChIP-Atlas
  • 11ENCODE
  • 2DGA
  • 1GTEx
Biosample type
  • 70tissue
  • 19primary cell
  • 10cell line
  • 6in vitro differentiated cells
Organ
  • 2905vasculature
  • 2859bodily fluid
  • 2848blood
  • 2845blood vessel
  • 2658vein
  • 807epithelium
  • 649kidney
  • 467brain
  • 421connective tissue
  • 367musculature of body
  • 301lung
  • 267intestine
  • 256pancreas
  • 247heart
  • 244limb
  • 213embryo
  • 193skin of body
  • 168large intestine
  • 157liver
  • 143extraembryonic component
  • 108stomach
  • 105eye
  • 99adipose tissue
  • 88bone element
  • 81uterus
  • 80mammary gland
  • 80small intestine
  • 79artery
  • 77prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 62adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 39esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21lymphatic vessel
  • 21ovary
  • 20thyroid gland
  • 19mouth
  • 18skeleton
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 105AMP
Genome assembly (visualization)
  • 103hg19
  • 12GRCh38
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

105 results

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Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
retina2363311111
pigmented layer of retina20
eye1422
corneal epithelium1
primary cell
retinal pigment epithelial cell221121
iris pigment epithelial cell1211
fibroblast of the conjunctiva211
retinal pigment epithelial cell1
cell line
WERI-Rb-1121121
fibroblast of the conjunctiva1
retinal cell1
in vitro differentiated cells
retinal pigment epithelial cell6
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