Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
ChIP-seq
Assay category
162
DNA binding
Target of assay
327
transcription factor
104
control
100
histone modification
99
histone
82
recombinant protein
58
narrow histone mark
57
RNA binding protein
41
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
63
November, 2017
50
May, 2020
24
August, 2017
20
December, 2017
3
August, 2021
2
October, 2019
Available data
151
bam
96
fastq
68
tagAlign
63
bigWig
49
bed narrowPeak
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
162
Homo sapiens
Biosample type
90
tissue
63
cell line
6
in vitro differentiated cells
3
primary cell
Organ
162
liver
148
brain
pancreas
79
epithelium
68
connective tissue
60
heart
48
vasculature
46
blood vessel
36
adipose tissue
32
limb
27
kidney
19
musculature of body
19
nerve
15
artery
15
embryo
10
spleen
8
vein
7
blood
7
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
162
AMP
Genome assembly (visualization)
64
hg19
42
GRCh38
Lab
162
AMP-T2D consortium
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
lab.title!
Bing Ren, UCSD
organ_slims!
pancreas
BIOSAMPLE
ASSAY
162 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
85
right lobe of liver
5
cell line
HepG2
63
in vitro differentiated cells
hepatocyte
6
primary cell
hepatocyte
3
Download