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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 26candidate regulatory elements
  • 26gene expression
  • 21target gene predictions
  • 20accessible chromatin
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 10eQTL
  • 7differential activity
  • 4Fine-mapped variants
  • 3variant allelic effects
  • 1caQTL
Date released
  • 46September, 2022
  • 28February, 2024
  • 26February, 2021
  • 10August, 2021
  • 10March, 2020
  • 5June, 2020
  • 5March, 2025
  • 5October, 2025
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 2May, 2024
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 102bed bed3+
  • 33tsv
  • 19bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 162Homo sapiens
Collection Tags
  • 46DGA
  • 42EpiMap
  • 29AMP
  • 17ChIP-Atlas
  • 13 T2DKP
  • 13T2DKP
  • 11ENCODE
  • 11STARNET
  • 5GTEx
  • 4HPAP
  • 2FNIH_projects-liver
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 68tissue
  • 59primary cell
  • 28cell line
  • 7in vitro differentiated cells
Organ
  • 2910vasculature
  • 2859bodily fluid
  • 2850blood vessel
  • 2848blood
  • 2658vein
  • 810epithelium
  • 649kidney
  • 467brain
  • 428connective tissue
  • 384musculature of body
  • 301lung
  • 267intestine
  • 256pancreas
  • 247heart
  • 244limb
  • 213embryo
  • 193skin of body
  • 168large intestine
  • 162liver
  • 143extraembryonic component
  • 108stomach
  • 105eye
  • 104adipose tissue
  • 88bone element
  • 84artery
  • 81uterus
  • 80mammary gland
  • 80small intestine
  • 77prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 62adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 39esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21lymphatic vessel
  • 21ovary
  • 20thyroid gland
  • 19mouth
  • 18skeleton
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 162AMP
Genome assembly (visualization)
  • 120hg19
  • 58GRCh38
  • 2hg18
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

162 results

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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver1431149219411
right lobe of liver211113
primary cell
hepatocyte213271411
endothelial cell of hepatic sinusoid446
hepatic stellate cell2112111
pancreatic endothelial cell13
Liver fetal (hepatocyte)1
cell line
HepG2232253
HuH-7111111
HuH-7.5111
hepatic stellate cell11
in vitro differentiated cells
hepatocyte211
hepatocyte(AFP)3
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