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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 131candidate regulatory elements
  • 75target gene predictions
  • 71chromatin state
  • 9accessible chromatin
  • 9binding sites
  • 4histone modifications
  • 1eQTL
  • 1gene expression
Date released
  • 210September, 2022
  • 70February, 2021
  • 6June, 2020
  • 4May, 2021
  • 4October, 2022
  • 3April, 2020
  • 1August, 2017
  • 1January, 2022
  • 1March, 2020
  • 1March, 2024
Available data
  • 230bed bed3+
  • 70bed bed9
  • 3bigWig
  • 1tsv
Organism
  • 301Homo sapiens
Collection Tags
  • 210EpiMap
  • 65ENCODE
  • 15ChIP-Atlas
  • 5DGA
  • 1GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 181tissue
  • 96cell line
  • 24primary cell
Organ
  • 2905vasculature
  • 2859bodily fluid
  • 2848blood
  • 2845blood vessel
  • 2658vein
  • 807epithelium
  • 649kidney
  • 467brain
  • 421connective tissue
  • 367musculature of body
  • 301lung
  • 267intestine
  • 256pancreas
  • 247heart
  • 244limb
  • 213embryo
  • 193skin of body
  • 168large intestine
  • 157liver
  • 143extraembryonic component
  • 108stomach
  • 105eye
  • 99adipose tissue
  • 88bone element
  • 81uterus
  • 80mammary gland
  • 80small intestine
  • 79artery
  • 77prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 62adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 39esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21lymphatic vessel
  • 21ovary
  • 20thyroid gland
  • 19mouth
  • 18skeleton
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 298AMP
  • 3LungMap
Genome assembly (visualization)
  • 299hg19
  • 71GRCh38
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

301 results

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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
lung33171611
left lung261313
right lung2211111
upper lobe of left lung733111
cell line
A549211918121
IMR-90221121
PC-9221111
WI38511
NCI-H226 cell1111
primary cell
fibroblast of lung6442
lung microvascular endothelial cell311
endothelial cell of artery1
type I pneumocyte1
type II pneumocyte1
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