Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
33
target gene predictions
28
candidate regulatory elements
15
chromatin state
12
binding sites
5
histone modifications
4
accessible chromatin
Date released
42
September, 2022
28
February, 2021
17
July, 2026
4
June, 2020
3
October, 2022
2
May, 2021
1
August, 2017
Available data
83
bed bed3+
14
bed bed9
Organism
97
Homo sapiens
Collection Tags
42
EpiMap
18
ChIP-Atlas
17
ENCODE
17
ENCODE-rE2G
2
DGA
Biosample type
49
cell line
43
primary cell
3
in vitro differentiated cells
2
tissue
Organ
3365
blood
2894
vasculature
2858
blood vessel
2853
bodily fluid
2659
vein
903
brain
801
epithelium
753
kidney
478
heart
459
connective tissue
430
lung
373
musculature of body
336
intestine
298
pancreas
285
skin of body
244
limb
234
liver
220
large intestine
213
embryo
171
extraembryonic component
157
eye
142
adipose tissue
129
stomach
111
muscle organ
105
bone element
97
mammary gland
95
placenta
93
small intestine
92
thymus
91
adrenal gland
91
uterus
88
artery
86
prostate gland
73
ureter
64
penis
63
spleen
62
gonad
62
lymph node
60
__MARKER__
49
spinal cord
44
thyroid gland
42
esophagus
31
testis
30
ovary
25
nerve
24
lymphoid tissue
24
skeleton
21
mouth
18
lymphatic vessel
15
breast
13
bronchus
13
pituitary gland
13
urinary bladder
12
bone marrow
12
tongue
12
vagina
5
trachea
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
97
AMP
Genome assembly (visualization)
80
hg19
31
GRCh38
lab.title!
Bing Ren, UCSD
BIOSAMPLE
TYPE
97 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
cell line
MCF-7
13
9
5
3
2
1
T47D
5
3
2
MCF 10A
3
3
primary cell
mammary epithelial cell
4
3
1
4
1
mammary gland epithelial cell
3
3
3
1
fibroblast of mammary gland
2
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
luminal epithelial cell of mammary gland
1
1
1
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
Download