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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 75candidate regulatory elements
  • 39target gene predictions
  • 35chromatin state
  • 18binding sites
  • 13histone modifications
  • 8accessible chromatin
  • 3eQTL
  • 2gene expression
Date released
  • 102September, 2022
  • 68February, 2021
  • 8June, 2020
  • 5May, 2021
  • 4October, 2022
  • 3January, 2022
  • 2March, 2024
  • 1August, 2017
Available data
  • 157bed bed3+
  • 34bed bed9
  • 2tsv
Organism
  • 193Homo sapiens
Collection Tags
  • 102EpiMap
  • 45ENCODE
  • 35ChIP-Atlas
  • 5DGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2GTEx
Biosample type
  • 89primary cell
  • 70cell line
  • 25tissue
  • 9in vitro differentiated cells
Organ
  • 2905vasculature
  • 2859bodily fluid
  • 2848blood
  • 2845blood vessel
  • 2658vein
  • 807epithelium
  • 649kidney
  • 467brain
  • 421connective tissue
  • 367musculature of body
  • 301lung
  • 267intestine
  • 256pancreas
  • 247heart
  • 244limb
  • 213embryo
  • 193skin of body
  • 168large intestine
  • 157liver
  • 143extraembryonic component
  • 108stomach
  • 105eye
  • 99adipose tissue
  • 88bone element
  • 81uterus
  • 80mammary gland
  • 80small intestine
  • 79artery
  • 77prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 62adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 39esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21lymphatic vessel
  • 21ovary
  • 20thyroid gland
  • 19mouth
  • 18skeleton
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 193AMP
Genome assembly (visualization)
  • 188hg19
  • 37GRCh38
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

193 results

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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
primary cell
foreskin keratinocyte1144
foreskin fibroblast621421
fibroblast of dermis4431
keratinocyte33312
dermis blood vessel endothelial cell622
cell line
GM23248211111
RPMI79512111
SK-MEL-52111
iPS DF 19.11221
iPS DF 19.7211
tissue
lower leg skin622
skin of body1113
suprapubic skin3
skin of forearm11
skin of prepuce of penis11
in vitro differentiated cells
foreskin keratinocyte111
iPS DF 4.7 Cell Line111
dermis microvascular lymphatic vessel endothelial cell11
skin fibroblast1
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