Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 47target gene predictions
  • 38accessible chromatin
  • 35candidate regulatory elements
  • 33differential activity
  • 24gene expression
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 8eQTL
  • 4variant allelic effects
  • 3Fine-mapped variants
  • 1caQTL
Date released
  • 46September, 2022
  • 43July, 2026
  • 30May, 2026
  • 28February, 2024
  • 26February, 2021
  • 12May, 2024
  • 10August, 2021
  • 10March, 2020
  • 5June, 2020
  • 5November, 2021
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • 3May, 2020
  • 2February, 2020
  • 2May, 2022
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 158bed bed3+
  • 27tsv
  • 23bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 237Homo sapiens
Collection Tags
  • 44DGA
  • 42EpiMap
  • 34AMP
  • 30pyxis
  • 28HDMA
  • 18T2DKP
  • 17ChIP-Atlas
  • 15ENCODE-rE2G
  • 12FNIH_projects-liver
  • 11 T2DKP
  • 11ENCODE
  • 5GTEx
  • 4HPAP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 134primary cell
  • 64tissue
  • 31cell line
  • 8in vitro differentiated cells
Organ
  • 3361blood
  • 2899vasculature
  • 2858blood vessel
  • 2849bodily fluid
  • 2658vein
  • 942epithelium
  • 892brain
  • 756kidney
  • 505connective tissue
  • 485heart
  • 436lung
  • 380musculature of body
  • 352intestine
  • 312pancreas
  • 291skin of body
  • 241limb
  • 237liver
  • 221large intestine
  • 210embryo
  • 171extraembryonic component
  • 161eye
  • 139adipose tissue
  • 138stomach
  • 111muscle organ
  • 106bone element
  • 102mammary gland
  • 100adrenal gland
  • 96placenta
  • 96small intestine
  • 92thymus
  • 91uterus
  • 86artery
  • 85prostate gland
  • 73ureter
  • 63gonad
  • 63penis
  • 62spleen
  • 61lymph node
  • 60__MARKER__
  • 48esophagus
  • 48spinal cord
  • 46thyroid gland
  • 31ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 232AMP
  • 5ENCODE
Genome assembly (visualization)
  • 133hg19
  • 115GRCh38
  • 2hg18
lab.title!
  • Jesse Engreitz, Stanford University
BIOSAMPLE
TYPE

237 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
differential activity
gene expression
chromatin state
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte71224131412
hepatic stellate cell34241111
endothelial cell of hepatic sinusoid646
endothelial cell1114
cholangiocyte114
tissue
liver11413192171
right lobe of liver621113
left lobe of liver1
cell line
HepG2422253
HuH-7211111
HuH-7.5211
hepatic stellate cell11
in vitro differentiated cells
hepatocyte221
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego