Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 65accessible chromatin
  • 57differential activity
  • 55target gene predictions
  • 48gene expression
  • 24candidate regulatory elements
  • 17chromatin state
  • 15eQTL
  • 11variant allelic effects
  • 6histone modifications
  • 5Fine-mapped variants
  • 5binding sites
  • 2sQTL
  • 2variant to gene
Date released
  • 47March, 2023
  • 44September, 2022
  • 31February, 2021
  • 26May, 2021
  • 25February, 2024
  • 24May, 2026
  • 20January, 2021
  • 18July, 2026
  • 18November, 2021
  • 9March, 2020
  • 8August, 2021
  • 7August, 2018
  • 6May, 2020
  • 6October, 2019
  • 4January, 2020
  • 4January, 2022
  • 4June, 2020
  • 3August, 2017
  • 2February, 2020
  • 2November, 2019
  • 1April, 2019
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 182bed bed3+
  • 76tsv
  • 57bigWig
  • 14bigBed narrowPeak
  • 13bed bed9
  • 3bam
  • 3bed gappedPeak
  • 3csv
  • 3xls
  • 2bigBed bed9
Organism
  • 312Homo sapiens
Collection Tags
  • 60 T2DKP
  • 48HPAP
  • 48T1D
  • 47T2DKP
  • 42AMP
  • 39EpiMap
  • 24DGA
  • 24pyxis
  • 18ENCODE-rE2G
  • 14ChIP-Atlas
  • 11ENCODE
  • 9CMDGA
  • 7T2D
  • 5GTEx
  • 4eQTLCatalogue
Biosample type
  • 146primary cell
  • 124tissue
  • 36cell line
  • 6in vitro differentiated cells
Organ
  • 3361blood
  • 2899vasculature
  • 2858blood vessel
  • 2849bodily fluid
  • 2658vein
  • 942epithelium
  • 892brain
  • 756kidney
  • 505connective tissue
  • 485heart
  • 436lung
  • 380musculature of body
  • 352intestine
  • 312pancreas
  • 291skin of body
  • 241limb
  • 237liver
  • 221large intestine
  • 210embryo
  • 171extraembryonic component
  • 161eye
  • 139adipose tissue
  • 138stomach
  • 111muscle organ
  • 106bone element
  • 102mammary gland
  • 100adrenal gland
  • 96placenta
  • 96small intestine
  • 92thymus
  • 91uterus
  • 86artery
  • 85prostate gland
  • 73ureter
  • 63gonad
  • 63penis
  • 62spleen
  • 61lymph node
  • 60__MARKER__
  • 48esophagus
  • 48spinal cord
  • 46thyroid gland
  • 31ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 272AMP
  • 20T1D
  • 18ENCODE
  • 2community
Genome assembly (visualization)
  • 179hg19
  • 79GRCh38
lab.title!
  • Jesse Engreitz, Stanford University
BIOSAMPLE
TYPE

312 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
differential activity
target gene predictions
gene expression
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell6823121
pancreatic beta cell83331
pancreatic alpha cell73331
pancreatic delta cell53431
pancreatic acinar cell63231
tissue
islet of Langerhans6111313112222
pancreas512531111
body of pancreas8284113
endocrine pancreas474
pancreatic ductal cell2
cell line
EndoC_BH183181
Panc1221
8988T211
HPDE6-E6E7211
pancreatic acinar cell1
in vitro differentiated cells
pancreatic ductal cell3
islet precursor cell1
progenitor cell of endocrine pancreas1
type B pancreatic cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego