Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2635pQTL
  • 50candidate regulatory elements
  • 37gene expression
  • 36accessible chromatin
  • 33chromatin state
  • 28target gene predictions
  • 21binding sites
  • 18differential activity
  • 15variant allelic effects
  • 9Fine-mapped variants
  • 8histone modifications
  • 6eQTL
  • 3caQTL
Date released
  • 2635February, 2025
  • 75September, 2022
  • 49February, 2021
  • 35September, 2023
  • 16February, 2024
  • 16January, 2020
  • 15May, 2020
  • 12March, 2020
  • 6June, 2020
  • 6November, 2021
  • 5February, 2020
  • 4February, 2023
  • 4March, 2023
  • 4October, 2022
  • 3April, 2020
  • 3January, 2022
  • 3November, 2019
  • 2March, 2026
  • 2October, 2019
  • 1August, 2017
  • 1August, 2021
  • 1March, 2024
  • 1May, 2019
Available data
  • 2698tsv
  • 163bed bed3+
  • 32bed bed9
  • 31bigWig
  • 8bigBed bed9
  • 4txt
Organism
  • 2899Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 72EpiMap
  • 35DGA
  • 35KPMP
  • 34ENCODE
  • 24ChIP-Atlas
  • 16GTEx
  • 10AMP
  • 6T2DKP
  • 4CMDGA
  • 4HPAP
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
Biosample type
  • 2719tissue
  • 167primary cell
  • 11cell line
  • 2in vitro differentiated cells
Organ
  • 3361blood
  • 2899vasculature
  • 2858blood vessel
  • 2849bodily fluid
  • 2658vein
  • 942epithelium
  • 892brain
  • 756kidney
  • 505connective tissue
  • 485heart
  • 436lung
  • 380musculature of body
  • 352intestine
  • 312pancreas
  • 291skin of body
  • 241limb
  • 237liver
  • 221large intestine
  • 210embryo
  • 171extraembryonic component
  • 161eye
  • 139adipose tissue
  • 138stomach
  • 111muscle organ
  • 106bone element
  • 102mammary gland
  • 100adrenal gland
  • 96placenta
  • 96small intestine
  • 92thymus
  • 91uterus
  • 86artery
  • 85prostate gland
  • 73ureter
  • 63gonad
  • 63penis
  • 62spleen
  • 61lymph node
  • 60__MARKER__
  • 48esophagus
  • 48spinal cord
  • 46thyroid gland
  • 31ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 2853AMP
  • 35KPMP
  • 6ENCODE
  • 3LungMap
  • 2community
Genome assembly (visualization)
  • 201hg19
  • 87GRCh38
lab.title!
  • Jesse Engreitz, Stanford University
BIOSAMPLE
TYPE

2899 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
target gene predictions
binding sites
differential activity
variant allelic effects
Fine-mapped variants
histone modifications
eQTL
caQTL
tissue
whole blood26351
coronary artery313322321
tibial artery31332232
ascending aorta41132131
aorta4144
primary cell
endothelial cell of umbilical vein625321
endothelial cell of hepatic sinusoid466
dermis blood vessel endothelial cell622
fibroblast of pulmonary artery211121
choroid plexus epithelial cell211111
cell line
smooth muscle cell of the coronary artery1111
choroid plexus epithelial cell111
dermis lymphatic vessel endothelial cell11
vein endothelial cell11
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego