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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1218target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2589February, 2021
  • 2511September, 2022
  • 333November, 2021
  • 322February, 2024
  • 289June, 2020
  • 286September, 2023
  • 250May, 2021
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 76May, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5825bed bed3+
  • 3576tsv
  • 869bed bed9
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10345Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 964ENCODE
  • 534AMP
  • 421T1D
  • 402T2DKP
  • 377DGA
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5247tissue
  • 2391primary cell
  • 2302cell line
  • 447in vitro differentiated cells
  • 4stem cell
Organ
  • 2895vasculature
  • 2855bodily fluid
  • 2844blood
  • 2836blood vessel
  • 2656vein
  • 907epithelium
  • 636kidney
  • 451connective tissue
  • 439brain
  • 367musculature of body
  • 306lung
  • 280intestine
  • 259pancreas
  • 244heart
  • 233limb
  • 210embryo
  • 198skin of body
  • 169large intestine
  • 156liver
  • 143extraembryonic component
  • 115stomach
  • 107eye
  • 93adipose tissue
  • 89bone element
  • 84mammary gland
  • 83small intestine
  • 81uterus
  • 75prostate gland
  • 73artery
  • 72placenta
  • 70adrenal gland
  • 63penis
  • 61lymph node
  • 61ureter
  • 49gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23nerve
  • 22ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 9682AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6743hg19
  • 1909GRCh38
  • 4hg18
lab.title!
  • Jesse Engreitz, Stanford University
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

10393 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121513
stomach4019119311
kidney291421610171
brain29163182112
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271313
CD8-positive, alpha-beta T cell7330143
B cell179862
endothelial cell371152912
cell line
HeLa-S355431
A549211811812
H1-hESC13811128
K5627221712
MCF-7952513
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4216411
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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