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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1218target gene predictions
  • 944chromatin state
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 93binding sites
  • 84Fine-mapped variants
  • 74accessible chromatin
  • 13caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2499September, 2022
  • 1021February, 2021
  • 324February, 2024
  • 286September, 2023
  • 155May, 2020
  • 128March, 2020
  • 111November, 2021
  • 104May, 2021
  • 102January, 2022
  • 101October, 2022
  • 81August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3576tsv
  • 3412bed bed3+
  • 869bed bed9
  • 108txt
  • 90bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 7935Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 960ENCODE
  • 434DGA
  • 281KPMP
  • 262AMP
  • 252T1D
  • 1744DN
  • 151GTEx
  • 148T2DKP
  • 118 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 98BLUEPRINT
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 4981tissue
  • 1761primary cell
  • 983cell line
  • 252in vitro differentiated cells
  • 4stem cell
Organ
  • 2853vasculature
  • 2802blood vessel
  • 2791bodily fluid
  • 2782blood
  • 2653vein
  • 678epithelium
  • 594kidney
  • 358brain
  • 337connective tissue
  • 334musculature of body
  • 286lung
  • 249intestine
  • 217heart
  • 217limb
  • 197pancreas
  • 175embryo
  • 159skin of body
  • 149large intestine
  • 127extraembryonic component
  • 111liver
  • 108stomach
  • 86adipose tissue
  • 80small intestine
  • 73uterus
  • 64adrenal gland
  • 64mammary gland
  • 63placenta
  • 61bone element
  • 60ureter
  • 56artery
  • 56prostate gland
  • 50penis
  • 44thymus
  • 42eye
  • 41esophagus
  • 41gonad
  • 39lymph node
  • 39spinal cord
  • 30spleen
  • 22nerve
  • 21lymphoid tissue
  • 21testis
  • 20ovary
  • 20thyroid gland
  • 18lymphatic vessel
  • 18mouth
  • 11breast
  • 11bronchus
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 7bone marrow
  • 3nose
  • 2pituitary gland
  • 1pericardium
Project
  • 7522AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4326hg19
  • 1415GRCh38
  • 4hg18
lab.title!
  • Jesse Engreitz, Stanford University
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

7983 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
gene expression
eQTL
differential activity
variant allelic effects
binding sites
Fine-mapped variants
accessible chromatin
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37202132
stomach40191911
kidney291416711
lung33171611
primary cell
common myeloid progenitor, CD34-positive271313
B cell179823
CD4-positive, alpha-beta memory T cell1499
monocyte2154211
endothelial cell379122
cell line
HeLa-S355431
A5492118181
H1-hESC138181
K56272271
MCF-79551
in vitro differentiated cells
hematopoietic multipotent progenitor cell1910101
neural progenitor cell5547
adipocyte4261
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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