Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
9
ChIP-seq
5
pCHi-C
4
DNase-seq
1
ATAC-seq
1
RRBS
Assay category
15
Transcription
9
DNA binding
5
DNA accessibility
1
DNA methylation
Target of assay
7
histone
7
histone modification
7
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
25
October, 2019
7
June, 2019
1
February, 2020
1
July, 2019
1
March, 2020
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
35
Homo sapiens
Biosample type
30
tissue
5
primary cell
Organ
890
pancreas
751
liver
666
connective tissue
490
adipose tissue
472
epithelium
357
heart
354
kidney
285
brain
201
vasculature
195
blood vessel
151
bone element
122
limb
106
artery
96
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
30
eye
25
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
35
AMP-T2D consortium
lab.title!
Karen Mohlke, UNC
Struan F.A. Grant, CHOP
month_released!
February, 2023
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
DNase-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
6
4
1
retina
1
3
ovary
1
primary cell
retinal pigment epithelial cell
3
1
1
Download