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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
Assay category
33
DNA binding
Target of assay
78
histone
78
histone modification
44
broad histone mark
40
transcription factor
35
control
33
narrow histone mark
10
RNA binding protein
2
chromatin remodeller
Date released
28
August, 2017
4
June, 2019
1
October, 2019
Available data
18
bed narrowPeak
18
bigWig
17
bam
13
fastq
7
tagAlign
5
bigBed narrowPeak
1
bed broadPeak
Organism
33
Homo sapiens
Biosample type
16
in vitro differentiated cells
13
tissue
4
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
33
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
lab.title!
Karen Mohlke, UNC
organ_slims!
blood
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
in vitro differentiated cells
adipocyte
16
tissue
subcutaneous abdominal adipose tissue
11
adipose tissue
1
islet of Langerhans
1
primary cell
cardiac fibroblast
2
mesenchymal stem cell
2
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