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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
1
ATAC-seq
1
pCHi-C
Assay category
9
DNA binding
1
DNA accessibility
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
4
January, 2019
3
November, 2018
2
December, 2018
1
January, 2018
1
March, 2020
Available data
9
bam
9
fastq
4
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
1
tsv
Organism
11
Homo sapiens
Biosample type
10
cell line
1
tissue
Organ
724
pancreas
643
connective tissue
474
adipose tissue
453
liver
376
heart
363
epithelium
344
kidney
283
brain
227
vasculature
222
blood vessel
158
bone element
136
artery
122
limb
96
musculature of body
60
eye
43
nerve
34
embryo
22
vein
20
lung
19
spleen
18
ureter
16
skeleton
10
blood
10
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
11
AMP-T2D consortium
Kyle Gaulton, UCSD
lab.title!
Klaus Kaestner, Upenn
Kyle Gaulton, UCSD
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
ATAC-seq
pCHi-C
cell line
GM12878
9
1
tissue
adrenal gland
1
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