Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
6
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
6
DNA binding
Target of assay
6
histone
6
histone modification
3
broad histone mark
3
control
narrow histone mark
Date released
10
February, 2018
8
August, 2021
December, 2017
2
May, 2021
1
January, 2018
Available data
20
bam
18
bigWig
14
tsv
11
fastq
3
bed narrowPeak
Organism
21
Homo sapiens
Biosample type
13
in vitro differentiated cells
8
cell line
Organ
675
liver
664
pancreas
651
connective tissue
479
adipose tissue
353
heart
339
kidney
261
epithelium
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
83
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
23
spleen
21
embryo
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
1
hg18
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
lab.title!
Klaus Kaestner, Upenn
month_released!
December, 2017
September, 2018
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
6
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
Download