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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
2
WGBS
1
DNase-seq
Assay category
24
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
10
histone
10
histone modification
8
control
6
narrow histone mark
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
7
January, 2019
4
October, 2019
March, 2020
October, 2017
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
788
liver
775
pancreas
681
connective tissue
489
adipose tissue
386
heart
366
epithelium
352
kidney
268
brain
232
vasculature
226
blood vessel
159
bone element
141
artery
122
limb
91
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
23
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
27
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
27
AMP-T2D consortium
lab.title!
Klaus Kaestner, Upenn
month_released!
March, 2020
October, 2017
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
WGBS
DNase-seq
tissue
spleen
20
2
1
islet of Langerhans
4
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