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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
86
ChIP-seq
47
total RNA-seq
Assay category
100
DNA accessibility
86
DNA binding
47
Transcription
Target of assay
92
histone
92
histone modification
58
broad histone mark
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
667
February, 2021
335
May, 2021
282
August, 2017
277
August, 2021
205
June, 2019
168
July, 2018
168
October, 2019
147
May, 2020
129
February, 2023
98
July, 2019
86
May, 2019
65
October, 2018
60
November, 2017
58
March, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
November, 2018
34
December, 2018
31
February, 2018
26
May, 2022
25
May, 2024
24
February, 2020
22
December, 2017
22
January, 2019
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
176
bam
153
bigWig
63
bed narrowPeak
63
bigBed narrowPeak
45
tsv
Organism
233
Homo sapiens
Biosample type
151
primary cell
82
tissue
Organ
liver
36
blood vessel
36
vasculature
18
brain
15
heart
5
limb
5
musculature of body
4
epithelium
4
kidney
3
artery
1
pancreas
Project
188
AMP
45
T1D
Genome assembly (visualization)
153
hg19
108
GRCh38
Lab
188
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
lab.title!
Klaus Kaestner, Upenn
organ_slims!
liver
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
233 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 25 more…
tissue
ascending aorta
12
thoracic aorta
12
germinal matrix
10
temporal lobe
10
aorta
9
+ See 6 more…
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