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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
11
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
18
October, 2019
1
February, 2020
Available data
18
bam
7
bigWig
5
tsv
3
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
744
pancreas
605
connective tissue
adipose tissue
427
epithelium
388
liver
324
kidney
296
heart
161
vasculature
158
blood vessel
158
bone element
121
artery
81
brain
73
limb
63
musculature of body
60
blood
60
bodily fluid
58
eye
25
embryo
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
7
vein
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
19
AMP-T2D consortium
lab.title!
Kyle Gaulton, UCSD
month_released!
November, 2017
organ_slims!
adipose tissue
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
11
5
2
1
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