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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
36
histone
36
histone modification
20
control
19
narrow histone mark
17
broad histone mark
11
transcription factor
1
RNA binding protein
Date released
198
August, 2017
196
October, 2019
92
May, 2019
88
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
6
May, 2021
3
March, 2020
Available data
35
bed narrowPeak
35
bigWig
32
bam
16
fastq
16
tagAlign
3
bed bed3+
Organism
36
Homo sapiens
Biosample type
30
in vitro differentiated cells
3
cell line
3
primary cell
Organ
6
embryo
6
liver
3
epithelium
Project
36
AMP
Genome assembly (visualization)
34
hg19
32
GRCh38
Lab
33
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
2
inconsistent control read length
lab.title!
Kyle Gaulton, UCSD
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
14
pancreatic endoderm
6
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
+ See 2 more…
cell line
HepG2
3
primary cell
hepatocyte
3
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