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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
total RNA-seq
100
ATAC-seq
48
ChIP-seq
1
pCHi-C
Assay category
150
Transcription
100
DNA accessibility
48
DNA binding
Target of assay
34
histone
34
histone modification
30
narrow histone mark
control
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
Date released
712
February, 2021
338
August, 2017
335
November, 2017
307
August, 2021
275
October, 2019
273
May, 2020
182
February, 2023
174
May, 2022
169
June, 2019
168
July, 2018
163
May, 2021
95
July, 2019
91
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
59
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
23
February, 2020
20
October, 2017
19
April, 2020
15
May, 2023
11
November, 2020
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
241
bam
241
bigWig
149
tsv
48
bed narrowPeak
27
tagAlign
26
fastq
21
bigBed narrowPeak
Organism
299
Homo sapiens
Biosample type
176
tissue
102
primary cell
21
cell line
Organ
176
liver
15
blood
15
bodily fluid
6
spleen
Project
299
AMP
Genome assembly (visualization)
241
hg19
188
GRCh38
Lab
299
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
organ_slims!
musculature of body
target.investigated_as!
control
BIOSAMPLE
ASSAY
299 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
27
spleen
6
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
GM12878
15
HepG2
5
1
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