Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 244gene expression
  • 188accessible chromatin
  • 109target gene predictions
  • 100candidate regulatory elements
  • 65differential activity
  • 53chromatin state
  • 43binding sites
  • 37variant allelic effects
  • 28histone modifications
  • 4eQTL
  • 3caQTL
Date released
  • 193February, 2021
  • 155September, 2023
  • 150September, 2022
  • 127November, 2021
  • 58February, 2024
  • 34May, 2021
  • 25June, 2020
  • 23August, 2021
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 7April, 2020
  • 6August, 2018
  • 6March, 2020
  • 6October, 2022
  • 5October, 2019
  • 3August, 2017
  • 3July, 2025
  • 2March, 2023
  • 2March, 2024
  • 2May, 2022
  • 1July, 2020
  • 1November, 2019
Available data
  • 508bed bed3+
  • 290tsv
  • 144bigWig
  • 78txt
  • 50bed bed9
  • 6csv
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
  • 1bed bed3
  • 1bed narrowPeak
Organism
  • 874Homo sapiens
Collection Tags
  • 198DGA
  • 159AMP
  • 155KPMP
  • 144EpiMap
  • 137T2DKP
  • 81ChIP-Atlas
  • 63ENCODE
  • 30CMDGA
  • 25 T2DKP
  • 15T1D
  • 4T2D
  • 2GTEx
Biosample type
  • 752primary cell
  • 53tissue
  • 43cell line
  • 26in vitro differentiated cells
Organ
  • 3365blood
  • 2898vasculature
  • 2853bodily fluid
  • 2849blood vessel
  • 2659vein
  • 885brain
  • 874epithelium
  • 739kidney
  • 455connective tissue
  • 440lung
  • 386musculature of body
  • 358intestine
  • 350heart
  • 296skin of body
  • 244limb
  • 226large intestine
  • 215embryo
  • 211pancreas
  • 194liver
  • 174extraembryonic component
  • 161eye
  • 140stomach
  • 111muscle organ
  • 104bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 91adipose tissue
  • 87prostate gland
  • 80artery
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 11bone marrow
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 583AMP
  • 155KPMP
  • 127ENCODE
  • 7LungMap
  • 2community
Genome assembly (visualization)
  • 558hg19
  • 227GRCh38
Encyclopedia version
  • 1Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
lab.title!
  • Kyle Gaulton, UCSD
BIOSAMPLE
TYPE

874 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell915622123
hepatocyte138311124
epithelial cell of proximal tubule16112111
glomerular endothelial cell1421211
endothelial cell of umbilical vein246521
tissue
pigmented layer of retina20
breast epithelium1352
esophagus squamous epithelium1262
kidney epithelium11
breast - mammary tissue1
cell line
EndoC_BH188131
keratinocyte31
choroid plexus epithelial cell111
colon epithelial cell111
epithelial cell of prostate111
in vitro differentiated cells
retinal pigment epithelial cell6
hepatocyte121
foreskin keratinocyte111
hepatocyte(AFP)3
mammary gland epithelial cell111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego