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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
50
transcription factor
45
histone
45
histone modification
29
control
23
broad histone mark
22
narrow histone mark
5
RNA binding protein
3
chromatin remodeller
Date released
198
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
30
October, 2018
27
May, 2020
25
December, 2017
20
August, 2021
19
June, 2019
12
October, 2017
10
February, 2018
10
November, 2019
7
January, 2019
3
March, 2020
Available data
44
bed narrowPeak
44
bigWig
41
bam
25
fastq
17
bigBed narrowPeak
16
tagAlign
11
bed bed3+
Organism
45
Homo sapiens
Biosample type
32
in vitro differentiated cells
5
tissue
3
cell line
3
primary cell
2
stem cell
Organ
23
liver
17
epithelium
embryo
Project
45
AMP
Genome assembly (visualization)
43
hg19
41
GRCh38
Lab
42
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
5
inconsistent control read length
lab.title!
Maike Sander, UCSD
organ_slims!
embryo
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
neural progenitor cell
14
hepatocyte
12
Posterior foregut
2
definitive endodermal cell
2
primitive gut cell
2
tissue
right lobe of liver
5
cell line
HepG2
3
primary cell
hepatocyte
3
stem cell
hESC
2
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