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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
215
histone
215
histone modification
152
narrow histone mark
63
broad histone mark
51
control
39
transcription factor
7
recombinant protein
6
RNA binding protein
2
chromatin remodeller
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
39
bam
39
bed narrowPeak
39
bigWig
32
bigBed narrowPeak
28
fastq
Organism
39
Homo sapiens
Biosample type
32
cell line
4
primary cell
3
tissue
Organ
25
blood
25
bodily fluid
8
kidney
3
spleen
2
epithelium
1
connective tissue
1
eye
1
heart
Project
39
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
39
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
1
inconsistent control
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
cell line
GM12878
25
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
retinal pigment epithelial cell
1
tissue
spleen
3
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