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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
1
Hi-C
Assay category
104
DNA binding
1
3D chromatin structure
Target of assay
56
histone
56
histone modification
36
broad histone mark
30
transcription factor
20
narrow histone mark
16
control
4
RNA binding protein
2
chromatin remodeller
Date released
649
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
October, 2022
3
June, 2018
3
March, 2019
1
August, 2022
Available data
104
bam
88
bed narrowPeak
88
bigBed narrowPeak
88
bigWig
35
fastq
Organism
105
Homo sapiens
Biosample type
72
tissue
28
cell line
5
primary cell
Organ
50
blood vessel
vasculature
28
brain
27
blood
27
bodily fluid
21
heart
7
limb
7
musculature of body
7
spleen
5
artery
5
epithelium
5
kidney
2
pancreas
1
liver
Project
105
AMP
Genome assembly (visualization)
88
hg19
87
GRCh38
Lab
105
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
1
inconsistent control
lab.title!
Mark McCarthy, Oxford
month_released!
October, 2022
organ_slims!
vasculature
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
Hi-C
tissue
temporal lobe
15
angular gyrus
13
germinal matrix
12
right atrium auricular region
10
muscle of leg
7
+ See 3 more…
cell line
GM12878
27
HepG2
1
primary cell
kidney epithelial cell
5
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