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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
21
total RNA-seq
18
ChIP-seq
3
ATAC-seq
Assay category
61
Transcription
18
DNA binding
3
DNA accessibility
Target of assay
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
28
December, 2018
25
February, 2020
23
January, 2019
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
64
fastq
23
bam
23
bigWig
19
zippedFastqFolder
15
bed narrowPeak
15
bigBed narrowPeak
5
tsv
Organism
82
Homo sapiens
Biosample type
59
primary cell
23
cell line
Organ
19
epithelium
19
pancreas
18
blood
18
bodily fluid
spleen
5
liver
Project
59
HPAP
23
AMP
Genome assembly (visualization)
23
GRCh38
20
hg19
Lab
59
Klaus Kaestner, Upenn
23
AMP-T2D consortium
lab.title!
Stephen Parker, UMich
month_released!
October, 2017
organ_slims!
spleen
BIOSAMPLE
ASSAY
82 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
cell line
GM12878
18
HepG2
5
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