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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
48
single cell RNA-seq
15
ChIP-seq
7
ATAC-seq
Assay category
168
Transcription
15
DNA binding
7
DNA accessibility
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
308
August, 2021
307
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
22
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
179
bam
177
bigWig
164
tsv
66
fastq
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
3
bed broadPeak
Organism
190
Homo sapiens
Biosample type
142
tissue
48
primary cell
Organ
161
pancreas
33
epithelium
16
brain
3
connective tissue
1
adipose tissue
1
spleen
Project
190
AMP
Genome assembly (visualization)
177
GRCh38
176
hg19
Lab
190
AMP-T2D consortium
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
Audit category:
4
missing controlled_by
lab.title!
Stephen Parker, UMich
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
190 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
120
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
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primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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