Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1690candidate regulatory elements
  • 1344target gene predictions
  • 976histone modifications
  • 904chromatin state
  • 894accessible chromatin
  • 815binding sites
  • 660gene expression
  • 433differential activity
  • 153eQTL
  • 138variant allelic effects
  • 68Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2567February, 2021
  • 2487September, 2022
  • 386May, 2021
  • 344February, 2024
  • 333November, 2021
  • 288June, 2020
  • 286September, 2023
  • 269May, 2026
  • 152May, 2020
  • 122August, 2021
  • 120March, 2020
  • 103January, 2022
  • 96October, 2022
  • 85January, 2020
  • 70March, 2023
  • 59February, 2020
  • 56January, 2021
  • 49May, 2022
  • 43November, 2022
  • 40May, 2024
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3August, 2017
  • 3November, 2020
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1January, 2018
  • 1July, 2020
  • 1June, 2021
  • 1September, 2018
Available data
  • 5977bed bed3+
  • 3510tsv
  • 861bed bed9
  • 541bigWig
  • 112txt
  • 39bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10696Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2475EpiMap
  • 1844ChIP-Atlas
  • 952ENCODE
  • 594DGA
  • 527AMP
  • 418T1D
  • 396T2DKP
  • 281KPMP
  • 269pyxis
  • 219BLUEPRINT
  • 1744DN
  • 141GTEx
  • 117 T2DKP
  • 108T2D
  • 99CMDGA
  • 98eQTLCatalogue
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5191tissue
  • 2739primary cell
  • 2344cell line
  • 465in vitro differentiated cells
  • 3stem cell
Organ
  • 2904vasculature
  • 2851bodily fluid
  • 2847blood vessel
  • 2840blood
  • 2657vein
  • 951epithelium
  • 669kidney
  • 507connective tissue
  • 479brain
  • 371heart
  • 357musculature of body
  • 310lung
  • 300pancreas
  • 285intestine
  • 244limb
  • 214embryo
  • 203skin of body
  • 185liver
  • 171large intestine
  • 146extraembryonic component
  • adipose tissue
  • 118stomach
  • 109eye
  • 89bone element
  • 86mammary gland
  • 83artery
  • 83small intestine
  • 83uterus
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 60__MARKER__
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 10029AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6869hg19
  • 1886GRCh38
  • 2hg18
lab.title!
  • Stephen Parker, UMich
organ_slims!
  • adipose tissue
BIOSAMPLE
TYPE

10744 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
tissue
whole blood26351
heart372012151412
stomach4021119311
kidney2914216101711
brain291631821121
primary cell
monocyte286181154
endothelial cell3711428202
B cell171086213
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
cell line
HeLa-S355531
A549211911812
H1-hESC13911128
K5627231612
MCF-7962513
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4612411
embryonic stem cell11561
cardiomyocytes11
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego