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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2980target gene predictions
  • 1670candidate regulatory elements
  • 1198accessible chromatin
  • 971histone modifications
  • 886chromatin state
  • 801binding sites
  • 647gene expression
  • 464differential activity
  • 160eQTL
  • 132variant allelic effects
  • 65Fine-mapped variants
  • 7sQTL
  • 5caQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 3pQTL
  • 1representative DNase hypersensitivity sites
Date released
  • 2554February, 2021
  • 2451September, 2022
  • 1971July, 2026
  • 386May, 2021
  • 330February, 2024
  • 330November, 2021
  • 312May, 2026
  • 285June, 2020
  • 266September, 2023
  • 144May, 2020
  • 127August, 2021
  • 116March, 2020
  • 103January, 2022
  • 94October, 2022
  • 78January, 2020
  • 66March, 2023
  • 59February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 29March, 2024
  • 28February, 2023
  • 17April, 2020
  • 12October, 2019
  • 11November, 2019
  • 9August, 2018
  • 8April, 2019
  • 8May, 2019
  • 4August, 2017
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2March, 2026
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1July, 2020
  • 1June, 2021
Available data
  • 7877bed bed3+
  • 849tsv
  • 842bed bed9
  • 523bigWig
  • 110txt
  • 34bed bed9+
  • 32bigBed bed9
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9957Homo sapiens
Collection Tags
  • 2442EpiMap
  • 1831ChIP-Atlas
  • 1445ENCODE-rE2G
  • 940ENCODE
  • 582DGA
  • 527AMP
  • 418T1D
  • 402T2DKP
  • 393HDMA
  • 312pyxis
  • 261KPMP
  • 219BLUEPRINT
  • 1744DN
  • 141 T2DKP
  • 135GTEx
  • 133CATlas
  • 108T2D
  • 98eQTLCatalogue
  • 96CMDGA
  • 63HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 3738primary cell
  • 3205tissue
  • 2548cell line
  • 509in vitro differentiated cells
  • 3stem cell
Organ
  • 3363blood
  • 2901vasculature
  • blood vessel
  • 2851bodily fluid
  • 2658vein
  • 942epithelium
  • 897brain
  • 756kidney
  • 504connective tissue
  • 488heart
  • 439lung
  • 357musculature of body
  • 354intestine
  • 318pancreas
  • 295skin of body
  • 244limb
  • 238liver
  • 223large intestine
  • 214embryo
  • 174extraembryonic component
  • 161eye
  • 141adipose tissue
  • 139stomach
  • 111muscle organ
  • 106bone element
  • 103mammary gland
  • 102adrenal gland
  • 97placenta
  • 96small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 9317AMP
  • 330ENCODE
  • 261KPMP
  • 60T1D
  • 17LungMap
  • 15community
  • 5ITG
Genome assembly (visualization)
  • 6779hg19
  • 3806GRCh38
  • 4hg18
lab.title!
  • Stephen Parker, UMich
organ_slims!
  • blood vessel
BIOSAMPLE
TYPE

10005 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
sQTL
caQTL
hQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte2188611544121
fibroblast2834011026
endothelial cell173221282421
CD8-positive, alpha-beta T cell27743013
T-cell644
tissue
heart383751211412
stomach4240311911
kidney2829102161711
brain302923181121
head of caudate nucleus86
cell line
A549332111182
HeLa-S359531
H1-hESC39111128
K5623071162
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111011
neural progenitor cell65101547
adipocyte7441211
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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