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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2896target gene predictions
  • 2638pQTL
  • 1609candidate regulatory elements
  • 1013accessible chromatin
  • 949histone modifications
  • 863chromatin state
  • 774binding sites
  • 421gene expression
  • 392differential activity
  • 164eQTL
  • 100variant allelic effects
  • 74Fine-mapped variants
  • 7caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2394February, 2021
  • 2360September, 2022
  • 1984July, 2026
  • 355May, 2021
  • 320May, 2026
  • 271February, 2024
  • 264June, 2020
  • 206November, 2021
  • 140May, 2020
  • 131September, 2023
  • 122March, 2020
  • 106January, 2022
  • 105August, 2021
  • 91October, 2022
  • 75January, 2020
  • 55February, 2020
  • 47May, 2022
  • 40May, 2024
  • 36January, 2021
  • 32March, 2023
  • 29November, 2022
  • 28March, 2024
  • 20February, 2023
  • 13November, 2019
  • 12April, 2020
  • 9May, 2019
  • 9October, 2019
  • 8April, 2019
  • 4August, 2017
  • 4March, 2026
  • 3August, 2018
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 7473bed bed3+
  • 3206tsv
  • 819bed bed9
  • 370bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 34txt
  • 20csv
  • 2bigBed narrowPeak
  • 1bam
Organism
  • 11875Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2355EpiMap
  • 1767ChIP-Atlas
  • 1458ENCODE-rE2G
  • 903ENCODE
  • 415DGA
  • 393HDMA
  • 386T1D
  • 375AMP
  • 320pyxis
  • 257T2DKP
  • 219BLUEPRINT
  • 1744DN
  • 149GTEx
  • 133CATlas
  • 126KPMP
  • 107T2D
  • 101eQTLCatalogue
  • 97 T2DKP
  • 70CMDGA
  • 26FNIH_projects-heart
  • 23HPAP
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5875tissue
  • 3048primary cell
  • 2511cell line
  • 484in vitro differentiated cells
  • 3stem cell
Organ
  • 3363blood
  • 2901vasculature
  • 2860blood vessel
  • 2851bodily fluid
  • 2658vein
  • epithelium
  • 897brain
  • 756kidney
  • 504connective tissue
  • 488heart
  • 439lung
  • 357musculature of body
  • 354intestine
  • 318pancreas
  • 295skin of body
  • 244limb
  • 238liver
  • 223large intestine
  • 214embryo
  • 174extraembryonic component
  • 161eye
  • 141adipose tissue
  • 139stomach
  • 111muscle organ
  • 106bone element
  • 103mammary gland
  • 102adrenal gland
  • 97placenta
  • 96small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11519AMP
  • 206ENCODE
  • 126KPMP
  • 40T1D
  • 15community
  • 12LungMap
  • 5ITG
Genome assembly (visualization)
  • 6344hg19
  • 3659GRCh38
  • 4hg18
lab.title!
  • Stephen Parker, UMich
organ_slims!
  • epithelium
BIOSAMPLE
TYPE

11923 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart383751211412
stomach4240311911
kidney2829102161711
brain302923181121
primary cell
monocyte2188611544121
fibroblast2834011026
CD8-positive, alpha-beta T cell27743013
T-cell644
macrophage13321217731
cell line
A549332111182
HeLa-S359531
H1-hESC39111128
K5623071162
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111011
neural progenitor cell65101547
adipocyte7441211
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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