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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1550candidate regulatory elements
  • 1282target gene predictions
  • 971histone modifications
  • 851accessible chromatin
  • 836chromatin state
  • 810binding sites
  • 471gene expression
  • 162eQTL
  • 125variant allelic effects
  • 108differential activity
  • 74Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2402February, 2021
  • 2286September, 2022
  • 389May, 2021
  • 343February, 2024
  • 330November, 2021
  • 274June, 2020
  • 146September, 2023
  • 136May, 2020
  • 125March, 2020
  • 105January, 2022
  • 100August, 2021
  • 94October, 2022
  • 75January, 2020
  • 70March, 2023
  • 56January, 2021
  • 55February, 2020
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 28March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 8May, 2019
  • 7April, 2019
  • 4August, 2017
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5720bed bed3+
  • 3279tsv
  • 792bed bed9
  • 510bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 26csv
  • 25txt
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9861Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2274EpiMap
  • 1822ChIP-Atlas
  • 875ENCODE
  • 531AMP
  • 466DGA
  • 420T1D
  • 402T2DKP
  • 219BLUEPRINT
  • 1744DN
  • 149GTEx
  • 141 T2DKP
  • 141KPMP
  • 110T2D
  • 100CMDGA
  • 100eQTLCatalogue
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4971tissue
  • 2306cell line
  • 2162primary cell
  • 465in vitro differentiated cells
  • 3stem cell
Organ
  • 2904vasculature
  • 2851bodily fluid
  • 2840blood
  • 2839blood vessel
  • 2657vein
  • 951epithelium
  • kidney
  • 461brain
  • 456connective tissue
  • 357musculature of body
  • 310lung
  • 285intestine
  • 276pancreas
  • 259heart
  • 244limb
  • 214embryo
  • 203skin of body
  • 171large intestine
  • 155liver
  • 146extraembryonic component
  • 118stomach
  • 109eye
  • 89bone element
  • 86adipose tissue
  • 86mammary gland
  • 83small intestine
  • 83uterus
  • 78prostate gland
  • 75artery
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9337AMP
  • 330ENCODE
  • 141KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6550hg19
  • 1804GRCh38
  • 4hg18
lab.title!
  • Stephen Parker, UMich
organ_slims!
  • kidney
BIOSAMPLE
TYPE

9909 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
chromatin state
binding sites
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372015211421
stomach4021131911
brain291632181121
lung33171611
cell line
HeLa-S355531
A549211911182
H1-hESC13911128
K5627231162
MCF-7962153
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530413
B cell1710682
endothelial cell371142821
in vitro differentiated cells
neural progenitor cell55151047
hematopoietic multipotent progenitor cell1910111011
adipocyte4614211
embryonic stem cell11651
cardiomyocytes11
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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