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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2637pQTL
  • 2185target gene predictions
  • 1224accessible chromatin
  • 977histone modifications
  • 913chromatin state
  • 876candidate regulatory elements
  • 817binding sites
  • 442differential activity
  • 163eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 11gene expression
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2413February, 2021
  • 1984July, 2026
  • 846September, 2022
  • 333November, 2021
  • 320May, 2026
  • 299May, 2021
  • 290February, 2024
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 96October, 2022
  • 75August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 4August, 2017
  • 4March, 2026
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 6345bed bed3+
  • 2857tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 4txt
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 10443Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 938ENCODE
  • 833EpiMap
  • 425AMP
  • 416DGA
  • 401T2DKP
  • 393HDMA
  • 327T1D
  • 320pyxis
  • 181BLUEPRINT
  • 1744DN
  • 133CATlas
  • 111T2D
  • 110KPMP
  • 109 T2DKP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4904tissue
  • 3041primary cell
  • 2175cell line
  • 366in vitro differentiated cells
  • 3stem cell
Organ
  • 3316blood
  • 2818vasculature
  • 2799bodily fluid
  • 2798blood vessel
  • 2653vein
  • 758brain
  • 576epithelium
  • 404kidney
  • 395heart
  • 371connective tissue
  • 298lung
  • 241intestine
  • 225skin of body
  • 215musculature of body
  • 212pancreas
  • 191liver
  • 155large intestine
  • 150embryo
  • 147limb
  • 142eye
  • 112adipose tissue
  • 111muscle organ
  • 108extraembryonic component
  • 91stomach
  • 83uterus
  • 75mammary gland
  • 74bone element
  • 73adrenal gland
  • 71thymus
  • 68artery
  • 65placenta
  • 60__MARKER__
  • 60prostate gland
  • 58small intestine
  • 50spleen
  • 47ureter
  • 46gonad
  • 46lymph node
  • 44penis
  • 38thyroid gland
  • 32esophagus
  • 32spinal cord
  • 23ovary
  • 22testis
  • 18skeleton
  • 17nerve
  • 14lymphatic vessel
  • 13lymphoid tissue
  • 12bronchus
  • 12mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 2nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 9947AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5267hg19
  • 3893GRCh38
  • 4hg18
lab.title!
  • Stephen Parker, UMich
software_used.software.name!
  • r
BIOSAMPLE
TYPE

10491 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
accessible chromatin
histone modifications
chromatin state
candidate regulatory elements
binding sites
differential activity
eQTL
variant allelic effects
Fine-mapped variants
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
head of caudate nucleus86
heart195121181121
stomach233119211
kidney141021615111
primary cell
monocyte21886144121
fibroblast2840311026
endothelial cell17221322521
CD8-positive, alpha-beta T cell2743017
T-cell644
cell line
HeLa-S356321
H1-hESC381112
A54915111832
K5622411612
MCF-7812543
in vitro differentiated cells
hematopoietic multipotent progenitor cell12111091
neural progenitor cell2101541
adipocyte541221
embryonic stem cell16151
neuronal stem cell21222
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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