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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
112
DNA binding
27
Transcription
15
DNA accessibility
Target of assay
92
histone
92
histone modification
54
broad histone mark
38
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
315
August, 2021
314
October, 2019
218
June, 2019
202
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
151
bam
137
bigWig
111
bed narrowPeak
78
bigBed narrowPeak
73
fastq
26
tsv
1
csv
Organism
154
Homo sapiens
Biosample type
81
tissue
73
primary cell
Organ
73
pancreas
61
epithelium
57
heart
23
kidney
Project
154
AMP
Genome assembly (visualization)
137
hg19
136
GRCh38
Lab
154
AMP-T2D consortium
Audit category:
1
audit script error
Audit category:
32
missing controlled_by
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
154 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
snATAC-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
islet of Langerhans
1
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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