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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
137
ChIP-seq
31
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
137
DNA binding
32
Transcription
14
DNA accessibility
Target of assay
99
histone
99
histone modification
58
broad histone mark
41
narrow histone mark
20
transcription factor
18
control
10
RNA binding protein
6
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
315
August, 2021
314
October, 2019
218
June, 2019
202
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
181
bam
163
bigWig
132
bed narrowPeak
103
fastq
99
bigBed narrowPeak
31
tsv
1
csv
Organism
183
Homo sapiens
Biosample type
87
tissue
73
primary cell
23
cell line
Organ
72
pancreas
61
epithelium
57
heart
23
kidney
18
blood
18
bodily fluid
7
spleen
5
liver
Project
183
AMP
Genome assembly (visualization)
163
hg19
162
GRCh38
Lab
183
AMP-T2D consortium
Audit category:
32
missing controlled_by
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
intestine
BIOSAMPLE
ASSAY
183 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
spleen
7
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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cell line
GM12878
18
HepG2
5
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