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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
27
total RNA-seq
Assay category
59
DNA binding
27
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
308
August, 2021
307
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
61
bam
45
fastq
32
bigWig
30
bed narrowPeak
30
bigBed narrowPeak
27
tsv
Organism
86
Homo sapiens
Biosample type
84
tissue
2
primary cell
Organ
44
pancreas
20
adipose tissue
20
connective tissue
12
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
artery
2
epithelium
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
86
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
86
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent control read length
lab.title!
Xin Sun, UCSD
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
body of pancreas
24
1
endocrine pancreas
16
subcutaneous adipose tissue
10
1
omental fat pad
8
1
Ammon's horn
1
+ See 22 more…
primary cell
pancreatic acinar cell
2
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