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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
120
total RNA-seq
48
single cell RNA-seq
31
ChIP-seq
Assay category
187
DNA accessibility
168
Transcription
31
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
670
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
279
August, 2021
218
June, 2019
168
July, 2018
126
February, 2023
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
26
May, 2022
25
February, 2020
22
October, 2017
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
382
bam
374
bigWig
210
bed narrowPeak
210
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
164
tsv
50
fastq
Organism
386
Homo sapiens
Biosample type
283
tissue
103
primary cell
Organ
161
pancreas
81
kidney
53
epithelium
43
musculature of body
35
heart
32
limb
30
brain
20
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
386
AMP
Genome assembly (visualization)
374
GRCh38
351
hg19
Lab
386
AMP-T2D consortium
0
Katalin Susztak, Upenn
0
Kyle Gaulton, UCSD
Audit category:
32
inconsistent ontology term
BIOSAMPLE
ASSAY
386 results
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Clear Filters
DNase-seq
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
120
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
pancreatic beta cell
9
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
pancreatic alpha cell
7
+ See 32 more…
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