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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
21
ChIP-seq
15
total RNA-seq
12
ATAC-seq
2
Capture-C
1
RNA microarray
Assay category
113
Transcription
21
DNA binding
12
DNA accessibility
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
control
7
narrow histone mark
Date released
644
February, 2021
400
November, 2017
382
August, 2017
296
May, 2020
279
October, 2019
198
June, 2019
149
August, 2021
138
May, 2021
135
July, 2018
115
May, 2019
95
July, 2019
91
February, 2023
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
45
November, 2019
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
16
April, 2018
12
September, 2018
8
January, 2018
6
November, 2020
6
September, 2017
4
December, 2019
2
June, 2018
2
May, 2022
1
August, 2018
1
August, 2022
1
May, 2023
1
October, 2022
Available data
113
tsv
45
bam
30
bigWig
25
bed narrowPeak
20
tagAlign
2
bed bed3+
Organism
148
Homo sapiens
Biosample type
99
tissue
42
in vitro differentiated cells
8
cell line
Organ
92
heart
8
embryo
6
blood vessel
epithelium
6
vasculature
5
connective tissue
4
liver
2
artery
2
pancreas
1
adipose tissue
Project
149
AMP
Genome assembly (visualization)
41
hg19
38
GRCh38
Lab
145
AMP-T2D consortium
128
Katalin Susztak, Upenn
36
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
lab.title!
Maike Sander, UCSD
organ_slims!
epithelium
BIOSAMPLE
ASSAY
149 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
RNA microarray
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 9 more…
in vitro differentiated cells
neural progenitor cell
21
7
10
adipocyte
1
1
osteoblast
1
1
cell line
H1-hESC
8
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