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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
single cell RNA-seq
2
ATAC-seq
2
total RNA-seq
1
ChIP-seq
1
Hi-C
Assay category
35
Transcription
2
DNA accessibility
1
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
61
September, 2018
35
October, 2019
33
April, 2018
33
July, 2018
29
August, 2017
26
February, 2021
26
May, 2021
20
June, 2019
19
December, 2017
16
November, 2019
15
February, 2023
13
July, 2019
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
5
May, 2019
5
September, 2017
3
August, 2018
2
October, 2018
1
June, 2018
Available data
38
bigWig
36
bam
36
tsv
29
fastq
1
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
39
Homo sapiens
Biosample type
34
primary cell
5
cell line
Organ
53
pancreas
39
epithelium
7
heart
5
musculature of body
4
blood vessel
4
connective tissue
4
vasculature
3
liver
2
brain
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
36
AMP
3
T1D
Genome assembly (visualization)
39
hg19
36
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
39 results
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single cell RNA-seq
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
pancreatic alpha cell
3
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cell line
EndoC_BH1
2
2
1
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