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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
15
total RNA-seq
10
ATAC-seq
8
ChIP-seq
2
Capture-C
1
RNA microarray
Assay category
113
Transcription
10
DNA accessibility
8
DNA binding
Target of assay
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
8
control
Date released
670
February, 2021
318
November, 2017
269
May, 2020
213
August, 2017
199
June, 2019
168
July, 2018
158
May, 2021
134
August, 2021
118
October, 2019
108
July, 2019
103
February, 2023
88
November, 2018
63
December, 2017
61
March, 2020
51
November, 2019
April, 2018
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
11
September, 2017
10
December, 2019
10
October, 2017
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
113
tsv
33
bam
15
bigWig
10
bed narrowPeak
8
tagAlign
Organism
133
Homo sapiens
Biosample type
99
tissue
24
in vitro differentiated cells
10
cell line
1
primary cell
Organ
92
heart
8
embryo
6
blood vessel
6
vasculature
3
epithelium
2
artery
2
pancreas
1
adipose tissue
1
connective tissue
1
liver
Project
134
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
134
AMP-T2D consortium
128
Katalin Susztak, Upenn
33
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
month_released!
April, 2018
target.investigated_as!
histone
BIOSAMPLE
ASSAY
134 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
ChIP-seq
Capture-C
RNA microarray
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 9 more…
in vitro differentiated cells
neural progenitor cell
7
10
7
cell line
H1-hESC
8
EndoC_BH1
2
primary cell
hepatocyte
1
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