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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
25
ChIP-seq
15
total RNA-seq
10
ATAC-seq
Assay category
113
Transcription
25
DNA binding
10
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
8
control
Date released
406
November, 2017
296
May, 2020
295
October, 2019
258
February, 2021
213
June, 2019
166
August, 2017
148
August, 2021
118
May, 2019
104
May, 2021
101
February, 2023
94
December, 2017
90
July, 2019
80
April, 2019
80
November, 2018
49
March, 2020
39
February, 2018
35
December, 2018
30
January, 2019
22
February, 2020
17
October, 2017
11
July, 2018
10
April, 2018
10
December, 2019
7
January, 2018
6
November, 2020
5
November, 2019
2
June, 2018
2
May, 2022
1
October, 2022
1
September, 2018
Available data
113
tsv
49
bam
31
bigWig
26
bed narrowPeak
24
tagAlign
3
bed bed3+
Organism
148
Homo sapiens
Biosample type
98
tissue
38
in vitro differentiated cells
8
cell line
4
primary cell
Organ
92
heart
8
embryo
6
blood vessel
6
epithelium
6
vasculature
4
liver
2
artery
pancreas
adipose tissue
1
connective tissue
Project
148
AMP
Genome assembly (visualization)
41
GRCh38
40
hg19
Lab
148
AMP-T2D consortium
128
Katalin Susztak, Upenn
34
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
month_released!
September, 2020
organ_slims!
adipose tissue
pancreas
BIOSAMPLE
ASSAY
148 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 8 more…
in vitro differentiated cells
neural progenitor cell
21
7
10
cell line
H1-hESC
8
primary cell
hepatocyte
4
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